modules/untar

Extract files from tar, tar.gz, tar.bz2, tar.xz archives

untaruncompressextract

https://github.com/nf-core/modules/[...]/modules/nf-core/untar

Description

Extract files from tar, tar.gz, tar.bz2, tar.xz archives

Input

name:type

description

pattern

`meta{:bash}`
`:map`

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

`archive{:bash}`
`:file`

File to be untarred

*.{tar,tar.gz,tar.bz2,tar.xz}

Output

name:type

description

pattern

`untar{:bash}`

`meta{:bash}`
`:map`

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*/

`${prefix}{:bash}`
`:map`

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*/

`versions{:bash}`

`versions.yml{:bash}`
`:file`

File containing software versions

versions.yml

Tools

untar
GPL-3.0-or-later

Extract tar, tar.gz, tar.bz2, tar.xz files.

gnu.org/software/tar/manual

modules/untar

Description

Input

`meta{:bash}`
`:map`

`archive{:bash}`
`:file`

Output

`untar{:bash}`

`meta{:bash}`
`:map`

`${prefix}{:bash}`
`:map`

`versions{:bash}`

`versions.yml{:bash}`
`:file`

Tools

untar
GPL-3.0-or-later

included in

maintainers

get in touch

modules/untar

Description

Input

meta{:bash}:map

archive{:bash}:file

Output

untar{:bash}

meta{:bash}:map

${prefix}{:bash}:map

versions{:bash}

versions.yml{:bash}:file

Tools

untar GPL-3.0-or-later

included in

maintainers

get in touch

`meta{:bash}`
`:map`

`archive{:bash}`
`:file`

`untar{:bash}`

`meta{:bash}`
`:map`

`${prefix}{:bash}`
`:map`

`versions{:bash}`

`versions.yml{:bash}`
`:file`

untar
GPL-3.0-or-later