Description

Dump a cooler’s data to a text stream.

Input

name:type
description
pattern

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

cool{:bash}

:file

Path to COOL file

*.{cool,mcool}

resolution{:bash}

:integer

Resolution

Output

name:type
description
pattern

bedpe{:bash}

meta{:bash}

:map

Groovy Map containing sample information e.g. [ id:‘test’, single_end:false ]

*.bedpe{:bash}

:file

Output text file

*.bedpe

versions{:bash}

versions.yml{:bash}

:file

File containing software versions

versions.yml